STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6GSM4_VITVIU3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (533 aa)    
Predicted Functional Partners:
D7TZM1_VITVI
CBF domain-containing protein.
   
 
 0.999
D7U2A7_VITVI
Uncharacterized protein.
   
 0.999
F6GVJ3_VITVI
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
   
    0.999
F6GZQ7_VITVI
Uncharacterized protein.
   
  
 0.999
F6HAX1_VITVI
Sas10 domain-containing protein.
   
 0.999
VITISV_041221
Brix domain-containing protein.
   
 0.998
D7TIN5_VITVI
WD_REPEATS_REGION domain-containing protein.
   
  0.998
F6HF03_VITVI
Uncharacterized protein.
   
 0.998
D7THK7_VITVI
WD_REPEATS_REGION domain-containing protein.
   
 0.997
F6H187_VITVI
WD_REPEATS_REGION domain-containing protein.
   
 0.997
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.