STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6GSM5_VITVIPX domain-containing protein. (658 aa)    
Predicted Functional Partners:
F6GWI1_VITVI
zf-RVT domain-containing protein.
    
 
 0.849
D7TDH7_VITVI
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 
 0.788
D7UCP5_VITVI
Uncharacterized protein.
   
 
 0.661
ATG6
Uncharacterized protein.
    
 
 0.661
F6HGX9_VITVI
Uncharacterized protein.
    
 
 0.594
F6HHM1_VITVI
Vacuolar protein sorting-associated protein 11 homolog; Involved in regulating membrane fusion at the tonoplast and the prevacuolar compartment.
    
 
 0.574
F6GY50_VITVI
Uncharacterized protein.
   
  
 0.556
D7TD08_VITVI
Pep3_Vps18 domain-containing protein.
   
 
 0.444
D7TK03_VITVI
Uncharacterized protein.
      
 0.442
F6HJ05_VITVI
Uncharacterized protein.
      
 0.442
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.