STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6GTR3_VITVIUncharacterized protein. (243 aa)    
Predicted Functional Partners:
F6HCK0_VITVI
Uncharacterized protein.
   
 
 0.992
VITISV_041868
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 
 0.982
E0CQ81_VITVI
Uncharacterized protein.
  
 
 0.981
D7U4G7_VITVI
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.980
E0CV64_VITVI
RIBOSOMAL_L9 domain-containing protein.
   
 
 0.980
VITISV_043432
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.976
VITISV_019246
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.976
D7SVP5_VITVI
Uncharacterized protein.
  
 
 0.976
D7TB62_VITVI
Uncharacterized protein.
  
 
 0.976
D7TQ18_VITVI
Uncharacterized protein.
  
 
 0.976
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
Server load: low (30%) [HD]