STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6GWM3_VITVIUncharacterized protein. (241 aa)    
Predicted Functional Partners:
D7SJ02_VITVI
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.678
F6H2X4_VITVI
Cwf21 domain-containing protein.
    
 0.667
D7SYP2_VITVI
Sm domain-containing protein.
    
  0.666
D7TJ87_VITVI
Small nuclear ribonucleoprotein G.
    
  0.658
F6I5Z0_VITVI
RPOLD domain-containing protein.
   
 
 0.647
D7TMV8_VITVI
Uncharacterized protein.
  
 
 0.628
E0CTZ1_VITVI
Uncharacterized protein.
  
 
 0.628
D7UAJ8_VITVI
RPOLD domain-containing protein.
   
 
 0.585
VITISV_001610
Small nuclear ribonucleoprotein-associated protein.
    
  0.579
ABH1
MIF4G domain-containing protein.
    
  0.579
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.