STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6GWQ6_VITVIGATA transcription factor; Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. Belongs to the type IV zinc-finger family. Class A subfamily. (338 aa)    
Predicted Functional Partners:
F6HH28_VITVI
HTH cro/C1-type domain-containing protein.
    
 
 0.770
F6GY30_VITVI
Uncharacterized protein.
      
 0.619
F6I0I8_VITVI
Uncharacterized protein.
      
 0.619
VITISV_024542
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 
 0.615
D7TZW6_VITVI
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 
 0.615
D7T8T6_VITVI
Homeobox domain-containing protein.
    
 
 0.614
F6HDQ2_VITVI
Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.
      
 0.614
VITISV_010659
RRM domain-containing protein.
      
 0.611
D7SN08_VITVI
RRM domain-containing protein.
      
 0.611
F6GWY0_VITVI
Uncharacterized protein.
      
 0.611
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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