STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6GYQ8_VITVILaccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family. (524 aa)    
Predicted Functional Partners:
D7SW09_VITVI
Plastocyanin-like domain-containing protein.
  
    0.509
D7T0E4_VITVI
Plastocyanin-like domain-containing protein.
  
     0.506
F6GYA5_VITVI
Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family.
  
   
0.428
F6HQG3_VITVI
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
    0.422
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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