STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6H1E6_VITVIProtein kinase domain-containing protein. (520 aa)    
Predicted Functional Partners:
F6GTR9_VITVI
Uncharacterized protein.
    
 0.536
F6H7E5_VITVI
Protein kinase domain-containing protein.
  
 
0.519
D7TCL2_VITVI
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
0.509
E0CSG9_VITVI
Protein kinase domain-containing protein.
  
 
0.458
VITISV_000466
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
  
 
 
0.448
F6GX14_VITVI
Calreticulin.
   
  
 0.446
D7U2H8_VITVI
Calreticulin.
      
 0.444
D7UA21_VITVI
Calreticulin.
      
 0.444
F6HYX3_VITVI
Calreticulin.
      
 0.444
F6I6E9_VITVI
Uncharacterized protein; Belongs to the cytochrome P450 family.
    
 
 0.441
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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