STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6H2W0_VITVIToprim domain-containing protein. (913 aa)    
Predicted Functional Partners:
F6GU63_VITVI
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
 0.986
D7TBU5_VITVI
DUF1767 domain-containing protein.
    
 0.973
D7SQ12_VITVI
ERCC4 domain-containing protein.
   
 0.906
F6GU62_VITVI
HTH_40 domain-containing protein.
  
 0.841
F6HGS2_VITVI
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
 0.841
D7TAN9_VITVI
Uncharacterized protein.
  
 0.840
D7TAP1_VITVI
Uncharacterized protein.
  
 0.840
D7TGY5_VITVI
Uncharacterized protein.
  
 0.840
F6HK69_VITVI
Uncharacterized protein.
  
 0.840
F6I4R5_VITVI
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
 0.840
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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