STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6H384_VITVIUncharacterized protein. (725 aa)    
Predicted Functional Partners:
F6H6Q8_VITVI
Uncharacterized protein.
    
 0.949
PHYB
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.
    
 0.947
CRY1
Photolyase/cryptochrome alpha/beta domain-containing protein.
     
 0.939
D7SZG3_VITVI
Photolyase/cryptochrome alpha/beta domain-containing protein.
     
 0.937
F6HY45_VITVI
Uncharacterized protein.
     
 
0.900
COP1
COP1.
    
 0.882
D7UE91_VITVI
WD_REPEATS_REGION domain-containing protein.
    
 0.882
F6H6Q3_VITVI
WD_REPEATS_REGION domain-containing protein.
    
 0.817
D7T4P8_VITVI
Elf4 domain-containing protein.
   
 
 0.780
F6HX00_VITVI
Uncharacterized protein.
    
 0.636
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.