STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6H3Z7_VITVIUncharacterized protein. (1768 aa)    
Predicted Functional Partners:
E0CQF4_VITVI
Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
 
 0.597
D7SZ60_VITVI
Uncharacterized protein.
  
 
 0.588
F6GYY7_VITVI
Uncharacterized protein.
  
 
 0.588
F6GYY8_VITVI
Glyco_transf_5 domain-containing protein.
  
 
 0.588
F6H7M0_VITVI
Uncharacterized protein.
  
 
 0.588
D7SW54_VITVI
4-alpha-glucanotransferase.
  
 
 0.570
F6HQQ7_VITVI
Uncharacterized protein.
  
 
 0.570
D7SK33_VITVI
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.530
D7SXJ4_VITVI
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.530
F6HBK8_VITVI
Uncharacterized protein.
  
 0.530
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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