STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6H476_VITVIProtein kinase domain-containing protein. (201 aa)    
Predicted Functional Partners:
D7U4W1_VITVI
Uncharacterized protein; Belongs to the expansin family.
    
 0.639
F6GTP2_VITVI
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.633
D7SIL9_VITVI
COBRA-like protein; Belongs to the COBRA family.
      
 0.617
D7SMP8_VITVI
COBRA-like protein; Belongs to the COBRA family.
      
 0.617
F6HEW5_VITVI
C2H2-type domain-containing protein.
      
 0.617
F6HL87_VITVI
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
    
 
 0.617
F6HSG4_VITVI
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
    
 
 0.617
D7THS9_VITVI
Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.
    
 
 0.616
F6HI37_VITVI
Uncharacterized protein; Belongs to the SWEET sugar transporter family.
      
 0.611
D7TE83_VITVI
Uncharacterized protein.
      
 0.610
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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