STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6H4B0_VITVIPDCD2_C domain-containing protein. (376 aa)    
Predicted Functional Partners:
VITISV_042472
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.557
F6H9M6_VITVI
Uncharacterized protein.
    
 
 0.557
F6HD94_VITVI
Ribosomal_S5_C domain-containing protein.
    
 
 0.557
F6HM24_VITVI
S5 DRBM domain-containing protein.
    
 
 0.557
F6H502_VITVI
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.460
F6GZQ7_VITVI
Uncharacterized protein.
   
  
 0.420
F6HFG3_VITVI
Uncharacterized protein.
   
  
 0.405
F6I0N3_VITVI
Protein BCCIP homolog; Belongs to the BCP1 family.
   
  
 0.405
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.