F6H5H2_VITVI protein (Vitis vinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

F6H5H2_VITVI

Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (357 aa)

Predicted Functional Partners:

STS

0.738

RS

0.738

F6HP39_VITVI

0.738

STS-3

0.737

D7T5I5_VITVI

0.476

F6H168_VITVI

0.476

F6H8C7_VITVI

0.476

F6HGS0_VITVI

0.476

ACS1

0.474

D7TV63_VITVI

0.473

Your Current Organism:

Vitis vinifera

NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACS1	F6H5H2_VITVI	A5BL65	F6H5H2	Aminotran_1_2 domain-containing protein.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.	0.474
D7T5I5_VITVI	F6H5H2_VITVI	D7T5I5	F6H5H2	Aminotran_1_2 domain-containing protein.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.	0.476
D7TV63_VITVI	F6H5H2_VITVI	D7TV63	F6H5H2	Aminotran_1_2 domain-containing protein.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.	0.473
F6H168_VITVI	F6H5H2_VITVI	F6H168	F6H5H2	Aminotran_1_2 domain-containing protein.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.	0.476
F6H5H2_VITVI	ACS1	F6H5H2	A5BL65	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.	Aminotran_1_2 domain-containing protein.	0.474
F6H5H2_VITVI	D7T5I5_VITVI	F6H5H2	D7T5I5	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.	Aminotran_1_2 domain-containing protein.	0.476
F6H5H2_VITVI	D7TV63_VITVI	F6H5H2	D7TV63	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.	Aminotran_1_2 domain-containing protein.	0.473
F6H5H2_VITVI	F6H168_VITVI	F6H5H2	F6H168	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.	Aminotran_1_2 domain-containing protein.	0.476
F6H5H2_VITVI	F6H8C7_VITVI	F6H5H2	F6H8C7	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.	Aminotran_1_2 domain-containing protein.	0.476
F6H5H2_VITVI	F6HGS0_VITVI	F6H5H2	F6HGS0	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.	Aminotran_1_2 domain-containing protein.	0.476
F6H5H2_VITVI	F6HP39_VITVI	F6H5H2	F6HP39	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	0.738
F6H5H2_VITVI	RS	F6H5H2	F6HP29	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	0.738
F6H5H2_VITVI	STS	F6H5H2	F6HP15	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	0.738
F6H5H2_VITVI	STS-3	F6H5H2	P51071	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.	Stilbene synthase 3; Mediates resistance to pathogens which are sensitive to stilbenes; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	0.737
F6H8C7_VITVI	F6H5H2_VITVI	F6H8C7	F6H5H2	Aminotran_1_2 domain-containing protein.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.	0.476
F6HGS0_VITVI	F6H5H2_VITVI	F6HGS0	F6H5H2	Aminotran_1_2 domain-containing protein.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.	0.476
F6HP39_VITVI	F6H5H2_VITVI	F6HP39	F6H5H2	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.	0.738
RS	F6H5H2_VITVI	F6HP29	F6H5H2	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.	0.738
STS	F6H5H2_VITVI	F6HP15	F6H5H2	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.	0.738
STS-3	F6H5H2_VITVI	P51071	F6H5H2	Stilbene synthase 3; Mediates resistance to pathogens which are sensitive to stilbenes; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.	0.737

Server load: low (24%) [HD]

Permalink

Network

Cooccurrence

Databases

Neighborhood

Textmining

Fusion

Experiments

Coexpression

© STRING Consortium 2024

Credits

Access

Info

About