STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6H5L1_VITVIPhotolyase/cryptochrome alpha/beta domain-containing protein. (505 aa)    
Predicted Functional Partners:
D7U0W1_VITVI
Photolyase/cryptochrome alpha/beta domain-containing protein.
      
 0.797
F6HE53_VITVI
BZIP domain-containing protein.
   
  
 0.695
D7SU36_VITVI
Photolyase/cryptochrome alpha/beta domain-containing protein.
   
  
 0.694
D7UA72_VITVI
ABC transporter domain-containing protein.
   
  
 0.657
F6H5D9_VITVI
WD_REPEATS_REGION domain-containing protein.
   
 
 0.650
D7SV72_VITVI
Rieske domain-containing protein.
     
 0.632
F6GUK7_VITVI
Rieske domain-containing protein.
     
 0.632
E0CUJ7_VITVI
Uncharacterized protein.
     
 0.630
VITISV_028723
Uncharacterized protein.
   
  
 0.624
VITISV_002798
J domain-containing protein.
   
  
 0.621
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.