F6H671_VITVI protein (Vitis vinifera) - STRING interaction network

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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protein homology

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Score

F6H671_VITVI

Uncharacterized protein. (792 aa)

Predicted Functional Partners:

D7TPB2_VITVI

0.679

F6GTP2_VITVI

0.678

F6HMX6_VITVI

0.667

D7THP0_VITVI

0.659

F6HF09_VITVI

0.658

D7TQU1_VITVI

0.434

D7T6D5_VITVI

0.422

Your Current Organism:

Vitis vinifera

NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D7T6D5_VITVI	D7THP0_VITVI	D7T6D5	D7THP0	TOG domain-containing protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.658
D7T6D5_VITVI	D7TQU1_VITVI	D7T6D5	D7TQU1	TOG domain-containing protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.658
D7T6D5_VITVI	F6GTP2_VITVI	D7T6D5	F6GTP2	TOG domain-containing protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.658
D7T6D5_VITVI	F6H671_VITVI	D7T6D5	F6H671	TOG domain-containing protein.	Uncharacterized protein.	0.422
D7T6D5_VITVI	F6HF09_VITVI	D7T6D5	F6HF09	TOG domain-containing protein.	Uncharacterized protein.	0.672
D7T6D5_VITVI	F6HMX6_VITVI	D7T6D5	F6HMX6	TOG domain-containing protein.	Uncharacterized protein.	0.660
D7THP0_VITVI	D7T6D5_VITVI	D7THP0	D7T6D5	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	TOG domain-containing protein.	0.658
D7THP0_VITVI	D7TQU1_VITVI	D7THP0	D7TQU1	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.684
D7THP0_VITVI	F6GTP2_VITVI	D7THP0	F6GTP2	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.691
D7THP0_VITVI	F6H671_VITVI	D7THP0	F6H671	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.659
D7THP0_VITVI	F6HF09_VITVI	D7THP0	F6HF09	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.658
D7THP0_VITVI	F6HMX6_VITVI	D7THP0	F6HMX6	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.658
D7TPB2_VITVI	F6GTP2_VITVI	D7TPB2	F6GTP2	Uncharacterized protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.443
D7TPB2_VITVI	F6H671_VITVI	D7TPB2	F6H671	Uncharacterized protein.	Uncharacterized protein.	0.679
D7TPB2_VITVI	F6HF09_VITVI	D7TPB2	F6HF09	Uncharacterized protein.	Uncharacterized protein.	0.422
D7TPB2_VITVI	F6HMX6_VITVI	D7TPB2	F6HMX6	Uncharacterized protein.	Uncharacterized protein.	0.667
D7TQU1_VITVI	D7T6D5_VITVI	D7TQU1	D7T6D5	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	TOG domain-containing protein.	0.658
D7TQU1_VITVI	D7THP0_VITVI	D7TQU1	D7THP0	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.684
D7TQU1_VITVI	F6GTP2_VITVI	D7TQU1	F6GTP2	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.687
D7TQU1_VITVI	F6H671_VITVI	D7TQU1	F6H671	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Uncharacterized protein.	0.434

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Network Stats

number of nodes:

11

number of edges:

53

average node degree:

9.64

avg. local clustering coefficient:

0.962

expected number of edges:

11

PPI enrichment p-value:

< 1.0e-16

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0010257

NADH dehydrogenase complex assembly

3 of 18

2.23

1.48

0.0016

GO:0022900

Electron transport chain

4 of 67

1.78

1.35

0.0016

GO:0006631

Fatty acid metabolic process

5 of 173

1.46

1.19

0.0016

GO:0006635

Fatty acid beta-oxidation

3 of 44

1.84

1.01

0.0105

GO:0006120

Mitochondrial electron transport, NADH to ubiquinone

2 of 9

2.35

0.97

0.0162

(more ...)

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0009055

Electron transfer activity

3 of 62

1.69

0.67

0.0493

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:1990204

Oxidoreductase complex

4 of 68

1.77

1.7

0.00022

GO:0005747

Mitochondrial respiratory chain complex I

3 of 24

2.1

1.66

0.00059

GO:0005743

Mitochondrial inner membrane

5 of 242

1.32

1.19

0.00059

GO:0005739

Mitochondrion

10 of 1019

1.0

1.15

3.87e-07

GO:0043231

Intracellular membrane-bounded organelle

11 of 4732

0.37

0.31

0.0041

(more ...)

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:8035

NADH dehydrogenase complex assembly

3 of 7

2.64

2.72

8.82e-06

CL:7864

Respiratory electron transport, and Porphyrin and chlorophyll metabolism

6 of 93

1.81

2.71

3.72e-07

CL:7895

NADH dehydrogenase complex

3 of 20

2.18

2.08

8.77e-05

CL:10111

Mixed, incl. Fatty acid beta-oxidation, and Valine, leucine and isoleucine degradation

5 of 126

1.6

1.99

8.96e-06

CL:10125

Fatty acid beta-oxidation, and acyl-CoA dehydrogenase activity

4 of 72

1.75

1.92

4.81e-05

(more ...)

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map00071

Fatty acid degradation

3 of 96

1.5

0.84

0.0166

map00190

Oxidative phosphorylation

3 of 138

1.34

0.73

0.0237

map04146

Peroxisome

3 of 150

1.3

0.72

0.0237

Reactome Pathways

pathway

description

count in network

strength

signal

false discovery rate

MAP-6799198

Complex I biogenesis

5 of 35

2.16

3.44

6.76e-08

MAP-611105

Respiratory electron transport

6 of 64

1.98

3.38

2.17e-08

MAP-163200

Respiratory electron transport, ATP synthesis by chemiosmotic coupling, and heat production by uncoupling proteins.

6 of 76

1.9

3.21

2.88e-08

MAP-1428517

The citric acid (TCA) cycle and respiratory electron transport

6 of 184

1.52

2.01

2.38e-06

MAP-8978868

Fatty acid metabolism

4 of 266

1.18

0.73

0.0156

(more ...)

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0005743

Mitochondrial inner membrane

4 of 172

1.37

0.88

0.0092

GOCC:0005739

Mitochondrion

7 of 803

0.94

0.73

0.0027

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0830

Ubiquinone

2 of 11

2.26

0.96

0.0169

KW-1278

Translocase

2 of 22

1.96

0.81

0.0297

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