STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6H680_VITVIWD_REPEATS_REGION domain-containing protein. (815 aa)    
Predicted Functional Partners:
F6I3V4_VITVI
Uncharacterized protein.
   
 
 0.697
F6H108_VITVI
WD_REPEATS_REGION domain-containing protein.
    
 0.554
F6H1W4_VITVI
Uncharacterized protein.
    
 0.540
F6HIJ7_VITVI
Uncharacterized protein.
    
 0.540
TPC1
Ion_trans domain-containing protein.
    
 0.507
F6H5D2_VITVI
Ion_trans domain-containing protein.
    
 0.507
VITISV_028792
WD_REPEATS_REGION domain-containing protein.
     
 0.486
F6HTW0_VITVI
WD_REPEATS_REGION domain-containing protein.
      
 0.483
F6HXL9_VITVI
WD_REPEATS_REGION domain-containing protein; Belongs to the disease resistance NB-LRR family.
      
 0.454
F6GZG9_VITVI
Uncharacterized protein.
   
 0.433
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.