STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6H6N9_VITVILRRNT_2 domain-containing protein. (906 aa)    
Predicted Functional Partners:
F6HUG6_VITVI
Uncharacterized protein.
   
 0.636
F6HUG3_VITVI
Uncharacterized protein.
   
 0.633
F6HUH2_VITVI
Uncharacterized protein.
   
 0.633
VITISV_019955
Uncharacterized protein.
    
 
 0.576
D7T0V6_VITVI
Uncharacterized protein.
    
 
 0.576
F6GSL8_VITVI
Uncharacterized protein.
    
 
 0.576
D7U936_VITVI
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
      
 0.480
D7TIY1_VITVI
Threonine dehydratase.
      
 0.471
D7SI42_VITVI
Uncharacterized protein.
  
     0.435
F6GW29_VITVI
Uncharacterized protein.
  
     0.434
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.