STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6H6S3_VITVIATG7_N domain-containing protein. (206 aa)    
Predicted Functional Partners:
F6HXX7_VITVI
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.
    
 0.974
E0CW01_VITVI
Autophagy_act_C domain-containing protein.
   
 0.901
D7U2P9_VITVI
Autophagy-related protein.
   
 0.891
D7T7Z0_VITVI
Autophagy-related protein.
   
 0.864
D7TE79_VITVI
Autophagy-related protein.
   
 0.864
D7U7U6_VITVI
Autophagy-related protein.
   
 0.864
F6H7L8_VITVI
Autophagy-related protein.
   
 0.864
F6HPA6_VITVI
Autophagy-related protein.
   
 0.864
F6HT40_VITVI
Autophagy protein 5; Required for autophagy.
    
 0.864
F6GTQ1_VITVI
WD_REPEATS_REGION domain-containing protein.
     
 0.839
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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