STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6H734_VITVIUncharacterized protein. (1750 aa)    
Predicted Functional Partners:
D7TAM3_VITVI
HORMA domain-containing protein.
   
 0.709
F6HLW1_VITVI
CPSF_A domain-containing protein.
    
 
 0.695
F6H596_VITVI
Uncharacterized protein.
   
 0.690
D7TZS0_VITVI
Uncharacterized protein.
    
 0.689
D7SLN5_VITVI
Uncharacterized protein.
    
 0.680
F6GTI2_VITVI
Peptidase_M1 domain-containing protein.
   
 0.677
F6H2M3_VITVI
TPR_REGION domain-containing protein.
   
 0.663
F6GZN3_VITVI
Uncharacterized protein.
  
 
 0.647
F6HEJ2_VITVI
Uncharacterized protein.
  
 
 0.637
D7SLI3_VITVI
TAFII55_N domain-containing protein.
    
 0.634
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.