STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6H8H0_VITVIProtein kinase domain-containing protein. (543 aa)    
Predicted Functional Partners:
F6H6A8_VITVI
J domain-containing protein.
    
 
 0.874
D7SL35_VITVI
Uncharacterized protein.
    
 
 0.850
VITISV_010522
Uncharacterized protein.
   
 
 0.737
VITISV_005063
Uncharacterized protein.
   
 
 0.737
D7SJJ0_VITVI
Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.
   
    0.658
F6I6F7_VITVI
Uncharacterized protein.
   
    0.658
VITISV_032577
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
 
 0.512
D7SLR7_VITVI
Uncharacterized protein.
    
 
 0.512
F6GV67_VITVI
Uncharacterized protein.
    
 
 0.512
F6HB06_VITVI
Uncharacterized protein.
    
 
 0.512
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
Server load: low (28%) [HD]