STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6HB09_VITVIChitin-binding type-1 domain-containing protein. (274 aa)    
Predicted Functional Partners:
D7U6I4_VITVI
SCP domain-containing protein.
   
  
 0.652
D7TM08_VITVI
Beta-hexosaminidase.
     
  0.650
F6GYZ3_VITVI
Glyco_hydro_20 domain-containing protein.
     
  0.650
F6GZ26_VITVI
Beta-hexosaminidase.
     
  0.650
F6H7W3_VITVI
Uncharacterized protein.
     
  0.650
D7SXW6_VITVI
Uncharacterized protein.
   
  
 0.615
E13B_VITVI
Glucan endo-1,3-beta-glucosidase; Implicated in the defense of plants against pathogens. Belongs to the glycosyl hydrolase 17 family.
   
  
 0.613
F6HLL9_VITVI
Uncharacterized protein; Belongs to the glycosyl hydrolase 17 family.
   
  
 0.613
F6HUG3_VITVI
Uncharacterized protein.
      
 0.613
F6H6H8_VITVI
Glyco_hydro_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
      
 0.578
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.