STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6HBN6_VITVISCP domain-containing protein. (123 aa)    
Predicted Functional Partners:
Q9M563_VITVI
Beta-1,3-glucanase; Belongs to the glycosyl hydrolase 17 family.
      
 0.611
D7SHZ8_VITVI
GP-PDE domain-containing protein.
   
  
 0.548
F6I225_VITVI
SCP domain-containing protein.
  
     0.490
F6H4Q6_VITVI
NB-ARC domain-containing protein.
   
  
 0.482
PAL1
Phenylalanine ammonia-lyase.
      
 0.473
F6HEB3_VITVI
Phenylalanine ammonia-lyase.
      
 0.470
F6HEB1_VITVI
Phenylalanine ammonia-lyase.
   
  
 0.449
D7TCJ8_VITVI
Phenylalanine ammonia-lyase.
      
 0.448
F6HEB0_VITVI
Phenylalanine ammonia-lyase.
      
 0.448
F6HEB2_VITVI
Phenylalanine ammonia-lyase.
      
 0.448
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.