STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6HDB9_VITVIUncharacterized protein. (65 aa)    
Predicted Functional Partners:
F6GYW2_VITVI
AB hydrolase-1 domain-containing protein.
   
  0.667
F6HTH3_VITVI
MADS-box domain-containing protein.
   
    0.658
F6GYC9_VITVI
DHFR domain-containing protein.
   
 
 0.457
F6H1I8_VITVI
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
   
 
 0.457
F6I0M2_VITVI
DHFR domain-containing protein.
   
 
 0.457
F6GZC9_VITVI
MADS-box domain-containing protein.
   
    0.422
F6GUI7_VITVI
PKS_AT domain-containing protein.
  
 
 0.409
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.