STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6HEF4_VITVIUncharacterized protein. (97 aa)    
Predicted Functional Partners:
F6H243_VITVI
Uncharacterized protein.
   
 
 0.571
D7T692_VITVI
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
   
   0.511
F6I489_VITVI
Uncharacterized protein.
   
  0.511
F6HI55_VITVI
KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family.
   
   0.510
F6I5K7_VITVI
Uncharacterized protein.
    
 
 0.508
F6H2P4_VITVI
TPR_REGION domain-containing protein.
   
 
 0.506
D7U9Y7_VITVI
Uncharacterized protein.
    
  0.504
VITISV_026535
DUF1713 domain-containing protein.
   
   0.502
rpl2
Ribosomal protein L2.
   
 
 0.502
E0CPL1_VITVI
Uncharacterized protein.
   
   0.502
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.