STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6HES7_VITVIUncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. (403 aa)    
Predicted Functional Partners:
D7U426_VITVI
Glutamine amidotransferase type-1 domain-containing protein.
 
 
 0.997
F6GTX9_VITVI
Uncharacterized protein.
 
  
 0.995
F6H5E5_VITVI
Amidohydro-rel domain-containing protein.
   
 
 0.992
F6GST3_VITVI
Uncharacterized protein.
  
 
 0.990
E0CQF4_VITVI
Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
   
0.978
PURA
Adenylosuccinate synthetase, chloroplastic; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.
  
 
 0.968
F6HIN2_VITVI
Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 0.934
D7SJV6_VITVI
Asparagine synthetase [glutamine-hydrolyzing].
    
 0.933
F6GSP9_VITVI
DHO_dh domain-containing protein.
  
 0.921
D7SIN7_VITVI
Uncharacterized protein.
    
 0.920
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.