STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6HHA7_VITVIUncharacterized protein. (223 aa)    
Predicted Functional Partners:
F6HPF0_VITVI
Uncharacterized protein.
      
 0.670
F6HP55_VITVI
Uncharacterized protein.
     
 0.627
F6H162_VITVI
Homeobox domain-containing protein.
      
 0.620
D7TVE9_VITVI
AP2/ERF domain-containing protein.
   
  
 0.619
VITISV_042445
Uncharacterized protein.
      
 0.616
D7SVJ3_VITVI
TF-B3 domain-containing protein.
   
  
 0.615
D7TLF2_VITVI
AP2/ERF domain-containing protein.
      
 0.615
F6HL25_VITVI
Homeobox domain-containing protein.
      
 0.615
F6HUA6_VITVI
AP2/ERF domain-containing protein.
      
 0.615
F6HZJ4_VITVI
AP2/ERF domain-containing protein.
      
 0.615
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.