STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6HJ02_VITVIUncharacterized protein. (126 aa)    
Predicted Functional Partners:
F6I1N1_VITVI
BAG domain-containing protein.
   
 0.707
F6I5K7_VITVI
Uncharacterized protein.
  
 
 0.690
F6GZ90_VITVI
Protein kinase domain-containing protein.
  
  
 0.624
F6H6C2_VITVI
S10_plectin domain-containing protein.
   
 0.624
F6HUN1_VITVI
S10_plectin domain-containing protein.
   
 0.624
D7SV08_VITVI
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
   
  0.622
D7T503_VITVI
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
   
  0.622
D7TAP6_VITVI
Aa_trans domain-containing protein.
      
 0.618
F6HG53_VITVI
Aa_trans domain-containing protein.
      
 0.618
F6HRV0_VITVI
Uncharacterized protein.
     
 0.617
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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