STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6HJR7_VITVIUncharacterized protein. (134 aa)    
Predicted Functional Partners:
VITISV_041653
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.832
D7U8S3_VITVI
Uncharacterized protein.
    
 0.818
VITISV_040622
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.813
VITISV_031270
Uncharacterized protein.
   
 0.797
D7U0Y7_VITVI
Uncharacterized protein.
    
 0.796
D7U1A5_VITVI
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.
    
 0.796
F6HVE8_VITVI
Uncharacterized protein.
   
 0.735
F6I4W8_VITVI
Uncharacterized protein.
   
 
 0.677
VITISV_006187
Uncharacterized protein.
   
 
 0.670
F6H2R3_VITVI
Uncharacterized protein.
   
 
 0.663
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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