STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6HK70_VITVIAAA domain-containing protein; Belongs to the AAA ATPase family. (459 aa)    
Predicted Functional Partners:
VITISV_030928
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
  
  
 0.512
F6HVK7_VITVI
AAA domain-containing protein.
  
   0.487
E0CUQ5_VITVI
AAA domain-containing protein.
  
 
 0.464
F6HL94_VITVI
ATPase_AAA_core domain-containing protein.
  
     0.462
D7U7L3_VITVI
Uncharacterized protein; Belongs to the AAA ATPase family.
  
 
 0.456
F6HVZ6_VITVI
Uncharacterized protein; Belongs to the AAA ATPase family.
  
 
 
 0.447
D7TK66_VITVI
AAA domain-containing protein.
  
     0.411
D7TB62_VITVI
Uncharacterized protein.
  
   0.405
rps16
30S ribosomal protein S16, chloroplastic.
  
   0.405
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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