STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6HLE8_VITVIRibosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family. (232 aa)    
Predicted Functional Partners:
F6HXP6_VITVI
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 0.993
VITISV_002374
Ribosomal_S10 domain-containing protein.
  
 0.988
F6HCK0_VITVI
Uncharacterized protein.
  
 0.987
F6HPY1_VITVI
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.984
F6HLE9_VITVI
Uncharacterized protein.
   
 0.983
F6I063_VITVI
Uncharacterized protein.
   
 0.983
VITISV_028810
Uncharacterized protein.
   
 0.980
VITISV_032083
Uncharacterized protein.
   
 0.979
VITISV_042472
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
  
 0.978
VITISV_037724
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
 0.977
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.