STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6HM52_VITVITranscription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (95 aa)    
Predicted Functional Partners:
D7TXX3_VITVI
Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.
   
 0.924
PHP
Uncharacterized protein.
    
  0.903
F6I5Z0_VITVI
RPOLD domain-containing protein.
   
 
 0.861
VITISV_017448
RPOL4c domain-containing protein.
   
   0.855
D7SV69_VITVI
RNA_pol_L_2 domain-containing protein.
   
   0.847
D7TPD7_VITVI
TFIIS N-terminal domain-containing protein.
    
 
 0.843
F6HWS5_VITVI
Uncharacterized protein.
    
  0.831
D7TDI5_VITVI
Uncharacterized protein.
   
   0.821
F6I4V8_VITVI
Uncharacterized protein.
    
  0.819
F6I4V9_VITVI
Uncharacterized protein.
    
  0.819
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.