STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6HMD1_VITVIUncharacterized protein. (218 aa)    
Predicted Functional Partners:
D7T7S2_VITVI
Uncharacterized protein.
  
 
  0.539
F6I528_VITVI
Uncharacterized protein.
  
 
  0.539
D7TSF9_VITVI
Uncharacterized protein.
  
  0.537
F6H6P1_VITVI
LRRNT_2 domain-containing protein.
  
 
  0.496
F6H803_VITVI
LRRNT_2 domain-containing protein.
  
 
  0.464
F6HY54_VITVI
Uncharacterized protein.
  
 
   0.434
F6HY56_VITVI
Malectin_like domain-containing protein.
  
     0.418
F6H1S7_VITVI
Malectin domain-containing protein.
  
 
   0.408
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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