STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6HMN5_VITVIUncharacterized protein. (996 aa)    
Predicted Functional Partners:
F6HDI3_VITVI
Uncharacterized protein.
    
  0.517
F6HDI4_VITVI
Uncharacterized protein.
    
  0.517
F6GVB5_VITVI
WD_REPEATS_REGION domain-containing protein.
   
 0.478
D7TW66_VITVI
C2 domain-containing protein.
      
 0.473
D7SL21_VITVI
B30.2/SPRY domain-containing protein.
    
 0.467
F6GX09_VITVI
Uncharacterized protein.
   
 0.431
F6GXU6_VITVI
BTB domain-containing protein.
  
     0.407
D7TN99_VITVI
Uncharacterized protein.
  
    0.400
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.