STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6HNF9_VITVIAuxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (679 aa)    
Predicted Functional Partners:
F6HZR1_VITVI
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
    
 
 0.645
F6GTR9_VITVI
Uncharacterized protein.
   
  
 0.640
F6GW39_VITVI
Uncharacterized protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.
      
 0.615
VITISV_015798
Uncharacterized protein.
      
 0.611
E0CPY3_VITVI
IPPc domain-containing protein.
      
 0.611
F6GXX6_VITVI
Uncharacterized protein.
      
 0.611
D7ST12_VITVI
PKS_ER domain-containing protein.
      
 0.587
F6HNN8_VITVI
Glycosyltransferase; Belongs to the UDP-glycosyltransferase family.
      
 0.578
F6HYD4_VITVI
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
    
 
 0.497
E0CVA2_VITVI
Ubiquitin-like domain-containing protein.
      
 0.479
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.