STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6HNS2_VITVIUncharacterized protein; Belongs to the peptidase S8 family. (646 aa)    
Predicted Functional Partners:
D7SVA4_VITVI
Eukaryotic translation initiation factor 3 subunit M; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
    
 
 0.614
F6H1D7_VITVI
Uncharacterized protein; Belongs to the peptidase S10 family.
   
  
 0.613
VITISV_021177
Carboxypeptidase; Belongs to the peptidase S10 family.
      
 0.611
VITISV_032502
Uncharacterized protein.
      
 0.611
D6CH07_VITVI
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
      
 0.611
D7SX69_VITVI
Carboxypeptidase; Belongs to the peptidase S10 family.
      
 0.611
D7SYY9_VITVI
Peptidase_M28 domain-containing protein.
      
 0.611
D7TEZ4_VITVI
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.
      
 0.611
D7TH57_VITVI
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
      
 0.611
D7TLX6_VITVI
Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.
    
 
 0.611
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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