STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6HPN6_VITVIUncharacterized protein. (1998 aa)    
Predicted Functional Partners:
F6HPK2_VITVI
Uncharacterized protein.
  
 
   0.526
F6HDG1_VITVI
SANT domain-containing protein.
  
     0.509
D7TDT3_VITVI
SAP domain-containing protein.
  
 
  0.504
D7TPK3_VITVI
Uncharacterized protein.
  
     0.504
F6H148_VITVI
Fmp27_GFWDK domain-containing protein.
  
     0.494
F6HEJ2_VITVI
Uncharacterized protein.
  
   0.494
F6HQ00_VITVI
Homeobox domain-containing protein.
  
     0.489
F6H0U7_VITVI
C2 NT-type domain-containing protein.
  
    0.486
F6I632_VITVI
Med12 domain-containing protein.
  
     0.482
F6I0W4_VITVI
Uncharacterized protein.
  
     0.479
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.