STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6HRM6_VITVIFumarylacetoacetase. (301 aa)    
Predicted Functional Partners:
E0CSC9_VITVI
Uncharacterized protein.
 
 0.911
F6H586_VITVI
Uncharacterized protein.
 
  
 0.900
F6HT53_VITVI
VOC domain-containing protein.
 
  
 0.759
D7SUD7_VITVI
Aspartate aminotransferase.
  
 
 0.728
E0CTU3_VITVI
Aspartate aminotransferase.
  
 
 0.728
F6H3U9_VITVI
Aspartate aminotransferase.
  
 
 0.727
D7SR19_VITVI
Aspartate aminotransferase.
  
 
 0.726
D7TBL7_VITVI
Aspartate aminotransferase.
  
 
 0.726
F6GSS9_VITVI
Malate synthase; Belongs to the malate synthase family.
  
  
 0.694
F6HP77_VITVI
GMC_OxRdtase_N domain-containing protein.
  
  
 0.692
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.