STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6HS50_VITVIUncharacterized protein. (762 aa)    
Predicted Functional Partners:
F6H6X9_VITVI
Uncharacterized protein.
   
 0.958
F6HWM1_VITVI
USP domain-containing protein; Belongs to the peptidase C19 family.
    
 0.919
F6I3D4_VITVI
USP domain-containing protein; Belongs to the peptidase C19 family.
    
 0.919
F6I3D5_VITVI
UCH domain-containing protein.
    
 0.919
D7SKW7_VITVI
WD_REPEATS_REGION domain-containing protein.
    
 0.850
D7SN41_VITVI
XS domain-containing protein.
    
 0.850
D7UBX2_VITVI
XS domain-containing protein.
    
 0.850
F6H8S5_VITVI
V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
    
 0.850
F6HR18_VITVI
WD_REPEATS_REGION domain-containing protein.
    
 0.850
VITISV_012429
Ubiquitin-like domain-containing protein.
   
  0.768
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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