STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6HTD9_VITVIFe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (273 aa)    
Predicted Functional Partners:
VITISV_006481
NmrA domain-containing protein.
      
 0.612
IFRL1
NmrA domain-containing protein.
   
  
 0.612
D7U4J2_VITVI
NmrA domain-containing protein.
      
 0.612
F6HT35_VITVI
Uncharacterized protein.
      
 0.611
F6I332_VITVI
Uncharacterized protein; Belongs to the cytochrome P450 family.
      
 0.611
F6I335_VITVI
Uncharacterized protein; Belongs to the cytochrome P450 family.
      
 0.611
F6I337_VITVI
Uncharacterized protein; Belongs to the cytochrome P450 family.
      
 0.611
F6H0Z4_VITVI
Uncharacterized protein.
      
 0.578
D7U0R2_VITVI
Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.506
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.