STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6HU77_VITVIEndoglucanase. (493 aa)    
Predicted Functional Partners:
F6GXD6_VITVI
Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family.
    
 0.623
D7T861_VITVI
Uncharacterized protein; Belongs to the pirin family.
    
 0.619
D7U9N6_VITVI
Uncharacterized protein; Belongs to the pirin family.
    
 0.619
D7TC79_VITVI
X8 domain-containing protein; Belongs to the glycosyl hydrolase 17 family.
    
 0.617
F6HMF5_VITVI
Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family.
   
 
 0.617
F6H686_VITVI
Uncharacterized protein; Belongs to the peptidase S10 family.
    
 
 0.613
F6H691_VITVI
Uncharacterized protein; Belongs to the peptidase S10 family.
    
 
 0.613
F6GVR7_VITVI
Glyco_hydro81C domain-containing protein.
      
 0.589
VITISV_012578
Expansin; Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Belongs to the expansin family. Expansin A subfamily.
   
 0.551
F6GV05_VITVI
Expansin; Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Belongs to the expansin family. Expansin A subfamily.
   
 0.537
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.