STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6HUN2_VITVIYgbB domain-containing protein. (80 aa)    
Predicted Functional Partners:
D7T1C6_VITVI
GHMP_kinases_N domain-containing protein.
 
 
 0.899
D7SKY1_VITVI
Uncharacterized protein.
 
 
 0.891
D7SHS1_VITVI
Uncharacterized protein.
  
  
 0.737
D7TGK2_VITVI
Uncharacterized protein.
  
   
 0.672
F6H0M5_VITVI
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
      
 0.625
D7TUA0_VITVI
Uncharacterized protein.
      
 0.551
F6HFC9_VITVI
Semialdhyde_dh domain-containing protein.
     
 0.550
F6HZT1_VITVI
7,8-dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
     
 0.548
F6HTS9_VITVI
TRUD domain-containing protein.
  
    0.530
F6HTT0_VITVI
Uncharacterized protein.
  
    0.530
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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