STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6HUN6_VITVISP-RING-type domain-containing protein. (922 aa)    
Predicted Functional Partners:
D7SVT3_VITVI
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.866
F6GZZ2_VITVI
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.866
VITISV_013543
Small ubiquitin-related modifier.
    
 0.727
D7SNT2_VITVI
Ubiquitin-like domain-containing protein.
    
 0.727
D7SX40_VITVI
Ubiquitin-like domain-containing protein.
    
 0.727
D7TED8_VITVI
Small ubiquitin-related modifier.
    
 0.727
D7UCT5_VITVI
Uncharacterized protein.
    
 0.727
D7UDJ9_VITVI
Small ubiquitin-related modifier.
    
 0.727
F6H212_VITVI
SP-RING-type domain-containing protein.
    
 
 0.716
VITISV_031803
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 
 0.621
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
Server load: low (26%) [HD]