STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6HWJ5_VITVITIR domain-containing protein. (519 aa)    
Predicted Functional Partners:
D7SQF1_VITVI
Uncharacterized protein.
  
     0.507
D7SI42_VITVI
Uncharacterized protein.
  
     0.491
F6GZB3_VITVI
Uncharacterized protein.
  
     0.460
D7SJT3_VITVI
Ubiquitin-like domain-containing protein.
  
     0.453
F6HUW8_VITVI
Rx_N domain-containing protein.
  
     0.435
F6HCE5_VITVI
LRRNT_2 domain-containing protein.
  
    0.432
D7TQP1_VITVI
LRRNT_2 domain-containing protein.
  
     0.430
F6H942_VITVI
LRRNT_2 domain-containing protein.
  
     0.428
D7TAT0_VITVI
Uncharacterized protein.
  
    0.426
D7U7C5_VITVI
LRRNT_2 domain-containing protein.
  
     0.420
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.