STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6HXE4_VITVIProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (375 aa)    
Predicted Functional Partners:
D7TXY0_VITVI
Serine/threonine-protein phosphatase.
    
 0.512
D7U9Z6_VITVI
PPM-type phosphatase domain-containing protein.
   
 0.484
F6HEH6_VITVI
Uncharacterized protein.
    
 
 0.484
D7T912_VITVI
PPM-type phosphatase domain-containing protein.
   
 0.479
F6HGJ2_VITVI
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
    
 0.422
D7STN1_VITVI
Uncharacterized protein.
      
 0.403
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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