STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6HYL4_VITVIUncharacterized protein. (288 aa)    
Predicted Functional Partners:
F6GU63_VITVI
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
    
 0.912
D7SQB0_VITVI
Uncharacterized protein.
   
 0.863
D7SU26_VITVI
RPA_C domain-containing protein.
   
 0.863
D7TS99_VITVI
Uncharacterized protein.
   
 0.766
D7TVE8_VITVI
DNA primase; Belongs to the eukaryotic-type primase small subunit family.
   
 0.757
F6H4J7_VITVI
DNA polymerase.
   
 0.753
D7TAP9_VITVI
DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis.
   
 0.694
F6HLJ1_VITVI
Uncharacterized protein.
   
 0.694
F6GVH0_VITVI
Uncharacterized protein.
    
 0.691
F6HE88_VITVI
Uncharacterized protein.
     
  0.606
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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