STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6HYU4_VITVIDUF4220 domain-containing protein. (914 aa)    
Predicted Functional Partners:
F6HXY8_VITVI
G-patch domain-containing protein.
   
 0.964
D7UCN8_VITVI
Uncharacterized protein.
    
 0.952
D7STS5_VITVI
PPIase cyclophilin-type domain-containing protein.
   
 0.940
F6H863_VITVI
Uncharacterized protein.
   
 0.905
D7TU07_VITVI
Uncharacterized protein.
   
 0.902
E0CVI1_VITVI
Matrin-type domain-containing protein.
   
 0.902
VITISV_028250
Uncharacterized protein.
   
 0.899
F6HKD0_VITVI
Matrin-type domain-containing protein.
   
 0.894
D7U143_VITVI
MPN domain-containing protein.
   
 
 0.888
F6HG67_VITVI
Uncharacterized protein.
 
 
  0.883
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.