Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
D7T2N4_VITVI | F6H9U0_VITVI | D7T2N4 | F6H9U0 | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. | 0.872 |
D7T2N4_VITVI | F6HFI8_VITVI | D7T2N4 | F6HFI8 | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family. | 0.758 |
D7T2N4_VITVI | F6HZF0_VITVI | D7T2N4 | F6HZF0 | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | Uncharacterized protein. | 0.591 |
D7T970_VITVI | D7TJ39_VITVI | D7T970 | D7TJ39 | Uncharacterized protein. | IU_nuc_hydro domain-containing protein. | 0.547 |
D7T970_VITVI | F6H9U0_VITVI | D7T970 | F6H9U0 | Uncharacterized protein. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. | 0.795 |
D7T970_VITVI | F6HH73_VITVI | D7T970 | F6HH73 | Uncharacterized protein. | Nudix hydrolase domain-containing protein. | 0.669 |
D7T970_VITVI | F6HN34_VITVI | D7T970 | F6HN34 | Uncharacterized protein. | SnoaL-like domain-containing protein. | 0.507 |
D7T970_VITVI | F6HZF0_VITVI | D7T970 | F6HZF0 | Uncharacterized protein. | Uncharacterized protein. | 0.551 |
D7T970_VITVI | VITISV_030807 | D7T970 | A5C4M9 | Uncharacterized protein. | Uncharacterized protein. | 0.697 |
D7TJ39_VITVI | D7T970_VITVI | D7TJ39 | D7T970 | IU_nuc_hydro domain-containing protein. | Uncharacterized protein. | 0.547 |
D7TJ39_VITVI | F6H4J6_VITVI | D7TJ39 | F6H4J6 | IU_nuc_hydro domain-containing protein. | Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family. | 0.911 |
D7TJ39_VITVI | F6HN34_VITVI | D7TJ39 | F6HN34 | IU_nuc_hydro domain-containing protein. | SnoaL-like domain-containing protein. | 0.547 |
D7TJ39_VITVI | F6HZF0_VITVI | D7TJ39 | F6HZF0 | IU_nuc_hydro domain-containing protein. | Uncharacterized protein. | 0.957 |
D7TT34_VITVI | F6H9U0_VITVI | D7TT34 | F6H9U0 | Uncharacterized protein. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. | 0.591 |
D7TT34_VITVI | F6HZF0_VITVI | D7TT34 | F6HZF0 | Uncharacterized protein. | Uncharacterized protein. | 0.552 |
D7TT34_VITVI | VITISV_030807 | D7TT34 | A5C4M9 | Uncharacterized protein. | Uncharacterized protein. | 0.588 |
F6H4J6_VITVI | D7TJ39_VITVI | F6H4J6 | D7TJ39 | Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family. | IU_nuc_hydro domain-containing protein. | 0.911 |
F6H4J6_VITVI | F6HFI8_VITVI | F6H4J6 | F6HFI8 | Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family. | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family. | 0.973 |
F6H4J6_VITVI | F6HH73_VITVI | F6H4J6 | F6HH73 | Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family. | Nudix hydrolase domain-containing protein. | 0.951 |
F6H4J6_VITVI | F6HZF0_VITVI | F6H4J6 | F6HZF0 | Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family. | Uncharacterized protein. | 0.920 |
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