STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6I0J6_VITVICysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (359 aa)    
Predicted Functional Partners:
D7TIM8_VITVI
Uncharacterized protein.
 
 0.748
F6H5V4_VITVI
Uncharacterized protein.
 
 0.748
F6HU71_VITVI
Uncharacterized protein.
  
 0.748
D7SL30_VITVI
Uncharacterized protein.
  
 
 0.735
F6HQA7_VITVI
Uncharacterized protein.
  
 
 0.686
D7TE87_VITVI
Thioredoxin domain-containing protein.
  
 
 0.635
F6H7K9_VITVI
Thioredoxin domain-containing protein.
  
 
 0.635
F6HDB7_VITVI
PAPS_reduct domain-containing protein.
  
 
 0.635
F6HYK1_VITVI
Uncharacterized protein.
     
 0.632
F6GXL4_VITVI
Uncharacterized protein; Belongs to the TrpA family.
    
 0.625
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.