STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIP2;2Plasma membrane 22 aquaporin; Belongs to the MIP/aquaporin (TC 1.A.8) family. (279 aa)    
Predicted Functional Partners:
F6GV82_VITVI
Uncharacterized protein.
    
 
 0.626
VITISV_030671
Uncharacterized protein.
    
 
 0.624
D7T3A9_VITVI
Uncharacterized protein.
    
 
 0.624
F6GVD4_VITVI
zf-LSD1 domain-containing protein.
      
 0.617
D7TU80_VITVI
Uncharacterized protein.
      
 0.614
D7U738_VITVI
zf-LSD1 domain-containing protein.
      
 0.612
F6I2K1_VITVI
Uncharacterized protein.
      
 0.611
D7SQB3_VITVI
Ribulose bisphosphate carboxylase small chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO small chain family.
   
  
 0.581
D7TM57_VITVI
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.572
F6HWL8_VITVI
Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 
 0.561
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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