STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6I382_VITVIL-lactate dehydrogenase; Belongs to the LDH/MDH superfamily. (359 aa)    
Predicted Functional Partners:
D7TBL7_VITVI
Aspartate aminotransferase.
   
 0.960
E0CTU3_VITVI
Aspartate aminotransferase.
   
 0.956
F6H3U9_VITVI
Aspartate aminotransferase.
   
 0.956
D7SR19_VITVI
Aspartate aminotransferase.
   
 0.955
D7SUD7_VITVI
Aspartate aminotransferase.
   
 0.955
D7TJI9_VITVI
Uncharacterized protein.
   
 
 0.952
E0CUM8_VITVI
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.945
F6HBQ2_VITVI
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.938
26N20_30
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.936
F6HTA0_VITVI
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.936
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.